Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Angiogenesis (GO:0001525) Genes Targeted by hsa-mir-199b-3p in GCT Seminoma Korkola Cluster 107 Table contains all genes in the GCT Seminoma Korkola cluster number 107. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-199b-3p GO:0001525 1284 COL4A2 collagen, type IV, alpha 2 [Source:HGNC Symbol;Acc:2203] zzz999 Yes 133 ADM adrenomedullin [Source:HGNC Symbol;Acc:259] zzz999 51421 AMOTL2 angiomotin like 2 [Source:HGNC Symbol;Acc:17812] zzz999 1282 COL4A1 collagen, type IV, alpha 1 [Source:HGNC Symbol;Acc:2202] zzz999 Yes 54707 GPN2 GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:25513] zzz999 1537 CYC1 cytochrome c-1 [Source:HGNC Symbol;Acc:2579] zzz999 64787 EPS8L2 EPS8-like 2 [Source:HGNC Symbol;Acc:21296] zzz999 3678 ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:HGNC Symbol;Acc:6141] zzz999 Yes 10130 PDIA6 protein disulfide isomerase family A, member 6 [Source:HGNC Symbol;Acc:30168] zzz999 57111 RAB25 RAB25, member RAS oncogene family [Source:HGNC Symbol;Acc:18238] zzz999 5479 PPIB peptidylprolyl isomerase B (cyclophilin B) [Source:HGNC Symbol;Acc:9255] zzz999 6505 SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:HGNC Symbol;Acc:10939] zzz999 6281 S100A10 S100 calcium binding protein A10 [Source:HGNC Symbol;Acc:10487] zzz999 56005 C19orf10 chromosome 19 open reading frame 10 [Source:HGNC Symbol;Acc:16948] zzz999 4041 LRP5 low density lipoprotein receptor-related protein 5 [Source:HGNC Symbol;Acc:6697] zzz999 334 APLP2 amyloid beta (A4) precursor-like protein 2 [Source:HGNC Symbol;Acc:598] P 1366 CLDN7 claudin 7 [Source:HGNC Symbol;Acc:2049] zzz999 5652 PRSS8 protease, serine, 8 [Source:HGNC Symbol;Acc:9491] zzz999 6282 S100A11 S100 calcium binding protein A11 [Source:HGNC Symbol;Acc:10488] zzz999 55748 CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family) [Source:HGNC Symbol;Acc:24437] zzz999 54502 RBM47 RNA binding motif protein 47 [Source:HGNC Symbol;Acc:30358] P 29957 SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:HGNC Symbol;Acc:20662] zzz999 9518 GDF15 growth differentiation factor 15 [Source:HGNC Symbol;Acc:30142] zzz999 22820 COPG coatomer protein complex, subunit gamma [Source:HGNC Symbol;Acc:2236] zzz999 10848 PPP1R13L protein phosphatase 1, regulatory (inhibitor) subunit 13 like [Source:HGNC Symbol;Acc:18838] zzz999 79669 C3orf52 chromosome 3 open reading frame 52 [Source:HGNC Symbol;Acc:26255] zzz999 55227 LRRC1 leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:14307] P 5034 P4HB prolyl 4-hydroxylase, beta polypeptide [Source:HGNC Symbol;Acc:8548] zzz999 6781 STC1 stanniocalcin 1 [Source:HGNC Symbol;Acc:11373] zzz999 2990 GUSB glucuronidase, beta [Source:HGNC Symbol;Acc:4696] zzz999 5318 PKP2 plakophilin 2 [Source:HGNC Symbol;Acc:9024] zzz999 7416 VDAC1 voltage-dependent anion channel 1 [Source:HGNC Symbol;Acc:12669] zzz999 23554 TSPAN12 tetraspanin 12 [Source:HGNC Symbol;Acc:21641] zzz999 Yes 79672 FN3KRP fructosamine 3 kinase related protein [Source:HGNC Symbol;Acc:25700] zzz999 1824 DSC2 desmocollin 2 [Source:HGNC Symbol;Acc:3036] zzz999 64065 PERP PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637] zzz999 27233 SULT1C4 sulfotransferase family, cytosolic, 1C, member 4 [Source:HGNC Symbol;Acc:11457] zzz999 10217 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like [Source:HGNC Symbol;Acc:16890] zzz999 64116 SLC39A8 solute carrier family 39 (zinc transporter), member 8 [Source:HGNC Symbol;Acc:20862] zzz999 3397 ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein [Source:HGNC Symbol;Acc:5360] zzz999 Yes 23593 HEBP2 heme binding protein 2 [Source:HGNC Symbol;Acc:15716] zzz999 9446 GSTO1 glutathione S-transferase omega 1 [Source:HGNC Symbol;Acc:13312] zzz999 435 ASL argininosuccinate lyase [Source:HGNC Symbol;Acc:746] zzz999 64778 FNDC3B fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:24670] zzz999 57211 GPR126 G protein-coupled receptor 126 [Source:HGNC Symbol;Acc:13841] zzz999 4758 NEU1 sialidase 1 (lysosomal sialidase) [Source:HGNC Symbol;Acc:7758] zzz999 79184 BRCC3 BRCA1/BRCA2-containing complex, subunit 3 [Source:HGNC Symbol;Acc:24185] zzz999 55625 ZDHHC7 zinc finger, DHHC-type containing 7 [Source:HGNC Symbol;Acc:18459] zzz999 79850 FAM57A family with sequence similarity 57, member A [Source:HGNC Symbol;Acc:29646] zzz999 25829 TMEM184B transmembrane protein 184B [Source:HGNC Symbol;Acc:1310] zzz999 7841 MOGS mannosyl-oligosaccharide glucosidase [Source:HGNC Symbol;Acc:24862] zzz999 1499 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa [Source:HGNC Symbol;Acc:2514] zzz999 Yes 6238 RRBP1 ribosome binding protein 1 homolog 180kDa (dog) [Source:HGNC Symbol;Acc:10448] zzz999 9130 FAM50A family with sequence similarity 50, member A [Source:HGNC Symbol;Acc:18786] zzz999 2028 ENPEP glutamyl aminopeptidase (aminopeptidase A) [Source:HGNC Symbol;Acc:3355] zzz999 Yes 7358 UGDH UDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:12525] zzz999 64764 CREB3L2 cAMP responsive element binding protein 3-like 2 [Source:HGNC Symbol;Acc:23720] zzz999 7205 TRIP6 thyroid hormone receptor interactor 6 [Source:HGNC Symbol;Acc:12311] zzz999 1429 CRYZ crystallin, zeta (quinone reductase) [Source:HGNC Symbol;Acc:2419] zzz999 1829 DSG2 desmoglein 2 [Source:HGNC Symbol;Acc:3049] zzz999 10979 FERMT2 fermitin family member 2 [Source:HGNC Symbol;Acc:15767] zzz999 51 ACOX1 acyl-CoA oxidase 1, palmitoyl [Source:HGNC Symbol;Acc:119] P 55765 C1orf106 chromosome 1 open reading frame 106 [Source:HGNC Symbol;Acc:25599] zzz999 10370 CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 [Source:HGNC Symbol;Acc:1987] P 51330 TNFRSF12A tumor necrosis factor receptor superfamily, member 12A [Source:HGNC Symbol;Acc:18152] zzz999 Yes 10413 YAP1 Yes-associated protein 1 [Source:HGNC Symbol;Acc:16262] P 64285 RHBDF1 rhomboid 5 homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:20561] zzz999 29927 SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) [Source:HGNC Symbol;Acc:18276] zzz999 3875 KRT18 keratin 18 [Source:HGNC Symbol;Acc:6430] zzz999 19 ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 [Source:HGNC Symbol;Acc:29] P 11282 MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B [Source:HGNC Symbol;Acc:7048] zzz999 6382 SDC1 syndecan 1 [Source:HGNC Symbol;Acc:10658] zzz999 823 CAPN1 calpain 1, (mu/I) large subunit [Source:HGNC Symbol;Acc:1476] zzz999 10897 YIF1A Yip1 interacting factor homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:16688] zzz999 4092 SMAD7 SMAD family member 7 [Source:HGNC Symbol;Acc:6773] zzz999 25797 QPCT glutaminyl-peptide cyclotransferase [Source:HGNC Symbol;Acc:9753] zzz999 3912 LAMB1 laminin, beta 1 [Source:HGNC Symbol;Acc:6486] zzz999 2719 GPC3 glypican 3 [Source:HGNC Symbol;Acc:4451] zzz999 2348 FOLR1 folate receptor 1 (adult) [Source:HGNC Symbol;Acc:3791] zzz999 5493 PPL periplakin [Source:HGNC Symbol;Acc:9273] zzz999 5033 P4HA1 prolyl 4-hydroxylase, alpha polypeptide I [Source:HGNC Symbol;Acc:8546] zzz999 7422 VEGFA vascular endothelial growth factor A [Source:HGNC Symbol;Acc:12680] zzz999 Yes 1942 EFNA1 ephrin-A1 [Source:HGNC Symbol;Acc:3221] zzz999 Yes 23443 SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 [Source:HGNC Symbol;Acc:11023] zzz999 9189 ZBED1 zinc finger, BED-type containing 1 [Source:HGNC Symbol;Acc:447] zzz999 2335 FN1 fibronectin 1 [Source:HGNC Symbol;Acc:3778] P Yes 1192 CLIC1 chloride intracellular channel 1 [Source:HGNC Symbol;Acc:2062] zzz999 8273 SLC10A3 solute carrier family 10 (sodium/bile acid cotransporter family), member 3 [Source:HGNC Symbol;Acc:22979] zzz999

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